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Administrative Core: Directed by
Terry Hassold, this core integrates the projects
by organizing the routine seminars and workshops,
as well as the annual retreat. The Administrative
Core will oversee all fiscal management of the
program and facilitate university and agency
interactions. This core provides some general
administrative services, in particular the
interactions both in regards to budgets and
services of the other cores.
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Histology Core: Directed by Kwan
Hee Kim, this core provides services to obtain
histological sections and related methods to the
investicators in the center. The core also
provides training and individualized procedure
development for tissue preparation,
immunohistochemistry, and in situ hybridization.
The digital image analysis facility is available
to all investigators.
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Assay Core: Directed by Derek
McLean. The core is an assay core to analyze
hormone (i.e. steroid and gonadotropin) levels
in the animals exposed to endocrine disruptors.
Radioimmunoassays are routinely done for
steroids and the reagents are available for
gonadotropins of several of the species of
interest. The service provided are to perform
the assays on samples provided by the
investigators.
Toxicology Core: Directed by
Rolf Ingermann. This core is the assay of
toxins and metabolites in tissues and
biological fluids. The objective is to allow
investigators to analyze toxin levels and
metabolites in animals exposed to endocrine
disruptors. A regional toxicology laboratory a
the University of Idaho is available that
performs all the needed gas chromatography and
assays. The core laboratory coordinates the use
of this regional toxicology laboratory so that
this service is available to all the
investigators.
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Aquaculture Core: Directed by
Gary Thorgaard and Ken Cain, the aquaculture core
has been established to insure proper and
consistent handling and rearing of the animals
among the projects. The aquaculture core will be
composed of two parts. One component of the core
will be housed at Washington State University.
This facility will be composed of a number of
recirculating systems and will be used to support
small-scale laboratory experiments. The oversight
for this part of the aquaculture core will be
provided by Gary Thorgaard. The second component
will be at the University of Idaho aquaculture.
The University of Idaho core facility will be
used to support broodstock rearing and the more
long-term, applied experiments. The oversight for
this part of the core will be provided by Ken
Cain, director of the facility.
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Transgenic Core: Directed by
Michael Skinner, the Transgenic Core aids in
providing, maintaining, and identifying
transgenic and knockout mice at a subsidized cost
to investigators within the Center for
Reproductive Biology. Therefore, the objectives
of the center are: 1) Facilitate acquisition of
transgenic and knockout animals from outside
vendors at reduced costs; 2) Provide training to
Genotype transgenic or knockout mice; 3) Provide
expertise to maintain and establish initial
transgenic or knockout founders for colonies; 4)
Provide initial space for transgenic and knockout
colonies.
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Molecular Biology Core:
Co-Directed by Michael Griswold and Derek
Pouchnik, this Core provides DNA sequencing,
protein sequencing, oligonucleotide synthesis,
peptide synthesis, and some information services
to member of the Center for Reproductive Biology.
A state of the art core laboratory with all the
required equipment is available.
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Animal Reproduction Core:
Directed by Derek McLean. The Animal Reproduction
Core provides centralized facilities, services
and expertise on handling and housing laboratory
and domestic animals used by members of the
Center for Reproductive Biology in accomplishing
their research objectives. Services such as
animal handling, surgical technique, cannulation,
blood collection, tissue collection at either the
university's abattoir or commercial packing
plants will be aided by this core. Technical
advice on animal care and scientific design and
coordination of services will be provided by the
Core Director and a core technician associated
with the Director's laboratory. The facilities,
equipment, and animals of this core are
incorporated into the Department of Animal
Sciences animal facilities to capitalize on the
expertise and efficiency of this already
established unit.
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Genomics Core: Co-Directed by
Michael Griswold and Derek Pouchnik, the Genomics
Core provides state of the art genomics
micro-array technology equipment. The core
laboratory provides access to the both an
Affimetrix Micro-Array apparatus and data
analysis system, as well as a custom array
apparatus for glass slide array of investigator
initiated arrays. The Core has the
bio-informatics support for the procedures
performed and assists the investigators in data
analysis. Technical support is provided to
perform the analysis on the Affimetrix chips and
in the production of the custom arrays.
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Proteomics Core: Directed
by James E Bruce, the Proteomics Core provides
sstate-of-the art proteomics research on campus
and enable much greater insight in many
biological research programs at WSU. The
objectives of this core are to provide access to
technology and expertise capable of measuring
relative quantitation of proteins from complex
mixtures such as cell lysates, as well as
facilitate the identification for those proteins
found to be up- or down-regulated in response to
particular stimulus, disease or treatment of
interest. These capabilities will significantly
extend the understanding of many research
programs by providing systems-level comprehension
for cases where little or nothing is known about
the underlying biology for a physical process, as
well as provide a much broader view of functional
significance for specific genes currently known
to be involved in pathways that may represent
only a small subset of actual functionality. In
addition, this core lab will serve as a resource
for consultation, education and training in
current proteomics technology, help further
accelerate biological research programs at WSU,
and better educate WSU graduates for success in
the increasingly competitive biotechnology
sector.
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Bioinformatics Core:
Directed by Michael Skinner provides
computational expertise for genomic and
proteomic research studies. Staff can provide
investigators with recommendations for hardware
and software necessary to perform data
analysis, storage, and management. The
Bioinformatics core provides investigators with
centralized DNA/Protein, microarray, proteomics
data analysis services. The core consists of
secure high performance computers/servers and
storage devices linked to the genomics,
proteomics and image analysis core. The data
generated by these core facilities is
seamlessly integrated for analysis by most
commonly used analysis packages. The individual
users can also link to central servers to
access their data for analysis. WSU
Bioinformatics core operates within an academic
'hybrid zone' involving Life, Computer Sciences
and Engineering. Bioinformatics core services
will be accessed through the The
WSU-bioinformatics web site with links to the
servers, mirror sites for WWW sites for
DNA/protein analysis and centralized servers
including a Storage Area Network (SAN)
(web-based client/server interfaces).
http://www.bioinformatics.wsu.edu
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Molecular Cytogenetics
Core: Directed by Lisa Shaffer,
this core provides (1) routine karyotype
analysis on the investigator's
established human cell lines or human
clinical samples; (2) molecular
cytogenetic analysis (fluorescent in situ
hybridization, FISH) using the
investigator's clone and either the
investigator's cell lines or clinical
samples, or on normal control cell lines
from the Core; (3) 24-color karyotyping
of human cell lines to identify complex
rearrangements; (4) mapping of human
large-insert clones from the
investigator's laboratory to determine a
map position in normal control cell lines
from the Core; (5) assist in identifying
human large-insert clones for use in the
Core; (6) lymphoblastic EBV
transformation of human peripheral blood
samples to establish permanent cell
lines; (7) store investigator's
established cell lines, provide growing
cultures back to investigators, and
provide fixed cell pellets back to
investigators. The Core is willing to
engage in karyotype analysis of non-human
cell lines and clinical specimens if
investigators are willing to supply
normal examples from several individuals
from a species in order for the Core to
gain expertise prior to performing
karyotypic analysis on clinical
specimens. Future work could extend into
FISH on non-human cell lines using clones
and cell lines provided from the
investigators.
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Flow Cytometry Core:
Directed by Dr. William Davis, this core
provides members with access to the Flow
Cytometry Core facility and provide users
with personal support for cell sorting,
operation of equipment and data analysis.
Housed in the newly built Animal Disease
and Biotechnology Facility, the College
of Veterinary Medicine operates this
facility. This facility currently has
three flow cytometers: FACScan, FACSort,
FACSVantage (Becton Dickinson
Immunocytometry Systems). The FACScan is
a simple flow cytometer. It has a single
laser and can analyze five separate
parameters (side and forward scatter
light scatter and 3 fluorescent markers).
The FACSort has two lasers and can
analyze and sort cells based on 6
separate parameters (side and forward
scatter, and 4 fluorescent markers). The
FACS Vantage SE is a high speed cell
sorter. It has two lasers and can analyze
and sort based on 8 separate parameters
(side and forward scatter and 6
fluorescent markers). All flow cytometers
have internet access and are equipped
with software for data acquisition and
analysis. There are also two separate
computer workstations for data analysis
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